team A. Bouloumié 

-DINAMIX: Adipose tissues and vasculo-metabolic flexibility

Our research aims to elucidate the molecular and cellular mechanisms involved in metabolic adaptation in physiological contexts and during aging, whether physiological or accelerated by obesity.
We focus on 1) characterizing the cellular and functional heterogeneity of different white and brown adipose tissue deposits, and 2) determining their contribution to vasculometabolic flexibility. At the same time, we are studying the influence of the body distribution of adipose tissue on alterations in the regeneration and barrier function of the intestinal epithelium present in chronic inflammatory bowel diseases and in contexts of obesity.

L’Équipe

 
Tous / AllTeam leaderResearchersStudentsTechnical staff
Team leader

Anne BOULOUMIE-DIEHL

PhD, Inserm Researcher

Anaïs BRIOT

Researcher

Xavier COLLET

PhD, Inserm Researcher

Audrey FERRAND

Researcher

Florence TATIN

Engineer INSERM

Pauline DECAUNES BESSEDE

PhD Student CIFRE/ Diva Expertise

Léopold Devineaux

Engineer

Muriel QUARANTA-NICAISE

PhD Student

Juline MARJOLLET

PhD Student

Alexis ARCAS

PhD Student

Anne Gosset

PhD Student

Duvan ROJAS-GARCIA

PhD Student

Théo CALDERON

PhD Student

Rémi CENTRES

Team leader

Anne BOULOUMIE-DIEHL

PhD, HDR, INSERM Research Director (DR2), Team Leader

Career path
PhD in pharmacology, director M. Lafontan, Université P Sabatier, Toulouse (1994); Post-doc, Cardiovascular Institute (R. Busse), Frankfurt, Germany (1994-1998); CRCN INSERM U598 (1998-2001); Kovalevskaja award, Frankfurt, Germany (2002-2006); AVENIR award, I2MR, Toulouse (2007-2011), Since 2012, INSERM team leader, I2MC.

Main domains of expertise  
Adipose tissue, progenitor, immune cells, endothelial cells, adipogenesis, inflammation, fibrosis, senescence, aging, obesity.

PhD, Inserm Researcher

Anaïs BRIOT

PhD, Inserm Researcher

Career path
PhD in Molecular, Cellular and Integrated Pathophysiology, supervisor A Hovnanian (2009); Post-Doc Laboratory of L. Iruela-Arispe, UCLA, USA (2010-2015); Since 2016, CRCN INSERM Team Bouloumié, I2MC, Toulouse.

Main domains of expertise  
Vascular biology, cell biology, endothelial cells, adipose tissue, inflammation, aging, senescence.

Researcher

Xavier COLLET

PhD, HDR, Research Director INSERM 

Career path
PhD in Biochemistry (1988), Post-Doc in the laboratory of C. Fielding (1988-1991), Sabbatical stay: Columbia University, Department of Medicine, New-York, (A. Tall).  Since 2021, DR INSERM in Bouloumié team, I2MC, Toulouse. Director of CREFRE (July 2020), Director of SFR-BMT (since 2011), Co-director of Génotoul (since 2011).

Main domains of expertise  
Lipoprotein metabolism, lipids, cholesterol, intestinal absorption of lipids, microbiota.

PhD, Inserm Researcher

Audrey FERRAND

PhD, Inserm Researcher

Career path: Doctorat en pharmacologie, directeurs L. Pradayrol & C. Seva, Université P. Sabatier, Toulouse (2000-2004) ; Visiting scientist, T.C. Wang Lab, University of Massachussetts, Worcester, USA (2002 & 2003) ; Post-doc, J. Settleman Lab, MGH Cancer Center-Harvard Medical School, Boston, USA (2005-2006) ; Biomedical scientist, G. Baldwin & A. Shulkes Lab, University of Melbourne, Melbourne, Australia (2006-2009) ; CR1 INSERM (2009) ; HDR (2017); Responsable d’équipe INSERM, IRSD (2021-2025) ; Co-fondatrice du GDR Organoïdes (2021) ; Présidente du Conseil Scientifique du FC3R (2022-présent) ; Membre du comité exécutif du PEPR MED-OOC (2024-présent), Pilote du Réseau Thématique Organoïdes national (2025-présent).

Since October 2025, Audrey and her group (Muriel Quaranta-Nicaise, Duvan Rojas-Garcia, Alexis Arcas, Rémi Centrès, and Théo Calderon) have joined the Dinamix team. Within the I2MC, Audrey created and co-leads the NAMs research axis.

Area of expertise : Intestinal pathophysiology, Intestinal epithelium, Stem cells, Microenvironment, Fibroblasts, Extracellular matrix, Fibrosis, Tumor initiation, Organoids, Organ-on-a-chip, Mechanobiology.

Researcher

Florence TATIN

Researcher (CRCN INSERM)

Florence Tatin received her PhD in cell biology from University of Bordeaux in 2006. She did a post-doc in the fields of lymphatic development in the lab of Taija Makinen in London and then joined I2MC in September 2014 to work on the role of lymphatic vessels in cardiovascular diseases in the lab of Anne-Catherine Prats and Barbara Garmy-Susini. She obtained her position CRCN in 2018. Her research project now focusses on the importance of lymphatic endothelium in metabolic diseases, obesities and diabetes.

Main domains of expertise
Vascular development, valvulopathy, cell adhesion and signalisation.

Engineer INSERM

Pauline DECAUNES BESSEDE

Engineer INSERM

Career path
Licence professionnelle de Biotechnologies, Université Versailles- St Quentin en Yvelines, (2004); Assistant Engineer, INRA Jouy-en-Josas (2004-2006), INSERM Equipe AVENIR/Bouloumié, I2MR, Toulouse (2006-2009); TCN INSERM Equipe Bouloumié, I2MC, Toulouse (2010-2019); Since 2019, AI INSERM Team Bouloumié, I2MC.

Main area of expertise
Isolation and culture of human and mouse vascular and stromal cells by flow cytometry and/or magnetic beads; Approaches: Imaging, transcriptional, protein and lipid analyses.

PhD Student CIFRE/ Diva Expertise

Léopold Devineaux

Engineer

Muriel QUARANTA-NICAISE

Engineer 

Career path: Muriel obtained a Master’s degree in Cell Biology and Physiology from Paul Sabatier University, Toulouse, in 1996. From 1999 to 2013, as a Research Assistant, she worked at the Laboratory of Cell and Molecular Biology and Proliferation Control (B. Ducommun’team, Paul Sabatier University, Toulouse). She then passed the competitive examination for engineering positions and, from 2013 to 2024, joined the Toulouse Center for Physiopathology (N. Vergnolle’team) and the Institute for Research in Digestive Health. (A. Ferrand’ team).  She joined the I2MC in 2024.

Domaine d’expertise :Muriel specializes in the setup and culture of organoids. She participates in team projects and develops new techniques and approaches in cell biology and imaging. Approaches: imaging, protein analysis, and cell culture.

PhD Student

Juline MARJOLLET

PhD Student  

Le projet de thèse de Juline consiste à étudier les effets des œstrogènes sur les cellules endothéliales du tissus adipeux (thèse en cotutelle avec l’équipe Dinamix).

Cheminement de carrière

Ecole d’ingénieur Polytech Marseille en génie biologique spécialité biotechnologies & Master de recherche spécialité maladies métaboliques et vasculaires.

Domaines d’expertise

Tissu adipeux, aorte, cellules endothéliales, œstrogènes, approches in vivo.

PhD Student

Alexis ARCAS

PhD Student  

Alexis’s PhD project focuses on the development of synthetic extracellular matrix (ECM) models using multiphoton polymerization, a high-resolution 3D printing technique (Nanoscribe). We print submicrometer fiber networks with a stiffness similar to collagen, made of acrylic materials. The dimensions, position, orientation, density, and organization of the network are precisely controlled to determine the microarchitecture and mechanical properties of the matrices. This approach will allow us to better characterize the phenotype of human colon fibroblasts in artificial matrices mimicking the ECM of a healthy colon or one affected by Crohn’s disease. PhD co-supervised with LAAS-CNRS, ELiA team (2024-present).

Career path: Bachelor’s degree in Cell Biology and Physiology (BCP), University of Toulouse (2019-2022); Master’s degree in Biology and Health, specializing in Therapeutic Innovations and Tissue Engineering (IT²), University of Toulouse (2022-2024).

Area of expertise: Intestinal epithelium, Microenvironment, Fibroblasts, Extracellular matrix, Fibrosis, Organs-on-a-chip, Two-photon polymerization.

PhD Student

Anne Gosset

PhD Student

PhD Student

Duvan ROJAS-GARCIA

PhD Student  

Duvan’s doctoral project involves developing a platform for therapeutic screening of intestinal diseases using a colon-on-a-chip with a controlled environment. His scientific work focuses on 3D cell culture and microfluidics. (Thesis partly carried out within the framework of the ENVie project of the PEPR MED-OOC, co-supervised with the LAAS-CNRS, ELiA team).

Career path: Bachelor of Engineering in Chemistry, National University of Colombia, Bogotá (2016-2022); Master of Engineering degree in Biotechnology, AgroParisTech, Paris (2020-2022); PhD in Biotechnology, supervised by A. Ferrand & L. Malaquin, University of Toulouse, Toulouse (October 2022-June 2026).

Areas of expertise: Organ-on-a-chip, extracellular matrix, 3D culture, intestinal epithelium, bioprocesses

PhD Student

Théo CALDERON

PhD Student  

Théo’s PhD project involves optimizing and utilizing a colon-on-a-chip model developed in the laboratory in collaboration with LAAS-CNRS. This model, seeded with colorectal organoids and primary fibroblast cultures derived from patients, will allow researchers to study epithelial regeneration, better understand the intestinal alterations present in the context of inflammatory bowel diseases and metabolic diseases, particularly obesity and metabolic syndrome, and identify new therapeutic strategies. (PhD carried out within the framework of the ENVie project of the PEPR MED-OOC, co-supervised by LAAS-CNRS, ELiA team, 2025-present).

Career path:Bachelor’s degree in Biology (2023), University of Bordeaux. Master’s degree in Health Biology, specializing in Cell Biology, Physiology and Pathology (2025), University of Bordeaux.

Area of expertise: Cell biology, biotechnology, pathophysiology, intestinal epithelium, stem cells, microenvironment, organoids, organs-on-a-chip.

 

PhD Student

Rémi CENTRES

PhD Student  

Rémi’s PhD project involves developing a porcine colon-on-a-chip model to study alternatives to antibiotics. (PhD co-supervised with GenPhySE, MUSE team, INRAE).

Career path: Master’s degree in Biology-Health, specializing in Therapeutic Innovations and Tissue Engineering, at Paul Sabatier University in Toulouse (2025).

Area of expertise: Organoids, Organ-on-a-chip, Porcine intestinal physiology, Intestinal epithelium, Stem cells, Microenvironment.

Metabolic function of microvascular endothelium: Heterogeneity, nutrient sensing and handling

 

Principal investigators : Anaïs Briot, Anne Bouloumié

Our work on native and primary microvascular endothelial cells from subcutaneous and visceral human and mouse adipose depots aims at 1) identifying the cellular and molecular mechanisms involved in nutrient sensing and transport, 2) defining the inter- and intra-fat depot phenotypic and functional heterogeneity of endothelial cells and, 3) assessing the impact of obesity and aging on adipose depots endothelial cells metabolic function in human and mice.

From progenitor cells to mature adipocytes: Heterogeneity, differentiation and function

 

Principal investigators : Anne Bouloumié

Our objectives are to define the intrinsic and extrinsic molecular mechanisms governing the heterogeneity of adipocytes and progenitor cells in terms of their fat (white, beige and brown) and myofibrogenic fate and their intra- and inter-depot niche in physiological and pathological contexts of natural or obesity accelerated aging.

Dynamics and adaptation of adipose depot:

VASCULOMetabolic flexibility and fasting

 

Principal investigator : Anaïs Briot

Using distinct fasting protocols, our objectives are 1) to identify dynamic combinations of markers (metabolomic, transcriptomic and metagenomic) of metabolic inflexibility, 2) to assess the beneficial and deleterious consequences on the phenotype and functionality of adipose depot cells, and 3) to identify cellular and molecular mechanisms that selectively mimic the beneficial effects of intermittent fasting according to sex, age and metabolic health.

Adaptability of lymphatic endothelium in metabolic diseases

 

 

Principal investigators : Florence Tatin, Anais briot, Anne Bouloumie

Florence Tatin is interested in understanding the adaptability and heterogeneity of lymphatic endothelium in metabolic diseases. We are interested to determine the spatial organization of the lymphatic network in adipose tissue microenvironment with new approaches of 3D imaging by light sheet microscopy (IMACTIV-3D). In addition, obesity is well-recognized as an important rick factor for lymphatic dysfunction. We aim to better understand how adipose tissue may influence and interact with lymphatic endothelial cells, and inversely how dysfunction of lymphatic vessels may alter cell-responses of the adipose tissue. Towards this aim, we develop single-cell RNAseq analysis of endothelial cells, and cell sorting strategy associated with cell biology and biochemistry approaches.

Adipose deposits-intestinal epithelium dialogue & tissue alteration in obesity, inflammatory bowel Disease anD Cancer

Principal investigators: Audrey Ferrand, Anne Bouloumié

We hypothesize that, in the context of obesity, architectural, metabolic, and inflammatory changes in mesenteric and omental fat deposits, as elements of the intestinal crypt macroenvironment, contribute to the dysfunction of intestinal stem cell renewal capacities and compromise the barrier function of the epithelium. Furthermore, in chronic inflammatory bowel diseases (IBD) and colorectal cancer, alterations in the epithelium and stroma could in turn influence the metabolic and immune properties of these fat deposits.
By combining functional, pharmacological, and architectural analyses with multidisciplinary approaches integrating biomechanics, bioengineering, 4D imaging, and advanced machine learning and deep learning methods, we aim to characterize the interactions between the intestinal epithelium and its micro- and macro-environment, in particular the stromal niche and adipose deposits, and thus elucidate their contribution to the pathophysiological mechanisms involved in obesity, IBD, and colorectal cancer.
These projects are being developed as part of the I2MC’s NAMs research program and the MED-OOC PEPR.(https://www.pepr-medooc.fr/).

RECENT PUBLICATIONS

Non-destructive assessment of multi-material microtissue mechanics reveals the critical role of rigidity gradients in tumour growth and pressure. Ala A, Douillet C, Ferrand A, Velay V, Segonds S, Recher G, Bugarin F. Acta Biomateriala. 2025. In press.

3D imaging and single-cell analysis reveal cellular heterogeneity of lymphatic valve endothelial cell types. E, Morin R, Iacovoni JS, Draia-Nicolau T, Gomes A, M, Bernes-Lasserre P, Lagarde JM,  AC,  Garmy-Susini B, Bouloumié A, Anaïs Briot A, Tatin F. iScience. 2025. Open access

Unveiling how mitotic spindle orientation in 3D human colon organoids affects matrix displacements through a 4D study using DVC. Magne L, Pottier T, Michel D, Laussu J, Bonnet D, Alric L, Segonds S, Recher G, Bugarin F, Ferrand A.Sci Rep. 2025. PMID: 40595987. Pubmed.

Lack of fibro-inflammatory response in human mammary adipose tissue in obesity. Fallone F, Rebeaud M, Bouche C, Fontaine J, Arellano C, Ducoux-Petit M, Orgerit L, Deudon R, Nicolle R, Franchet C, Estève D, Mouton-Barbosa E, Dauvillier S, Moutahir M, Burlet-Schiltz O, Bouloumié A, Vaysse C, Muller C. Int J Obes (Lond). 2025.  PMID: 39738492. Pubmed.

Deciphering the interplay between biology and physics with a finite element method-implemented vertex organoid model : A tool for the mechanical analysis of cell behavior on a spherical organoid shell. Laussu J, Michel D, Magne L, Segonds S, Marguet S, Hamel D, Quaranta-Nicaise M, Barreau F, Mas E, Velay V, Bugarin F, Ferrand A. PLoS Comput Biol. 2025. PMID: 39792958. Pubmed.

Endothelial DLL4 is an Adipose Depot-Specific fasting sensor regulating fatty acid fluxes. Aupetit A, Decaunes P, Belles C, Riant E, Galitzky J, Chapouly C, Laisné M, Flores-Flores R, Chaput B, Vié K, Arnal JF, Bouloumié A, Briot A. Arterioscler Thromb Vasc Biol. 2023 PMID: 36924232. Pubmed

Notch activation shifts the fate decision of senescent progenitors toward myofibrogenesis in human adipose tissue. Boulet N, Briot A, Jargaud V, Estève D, Rémaury A, Belles C, Viana P, Fontaine J, Murphy L, Déon C, Guillemot M, Pech C, Veeranagouda Y, Didier M, Decaunes P, Mouisel E, Carpéné C, Iacovoni JS, Zakaroff-Girard A, Grolleau JL, Galitzky J, Ledoux S, Guillemot JC, Bouloumié A. Aging Cell. 2023 Jan 8:e13776. Pubmed

Periprostatic Adipose Tissue Displays a Chronic Hypoxic State that Limits Its Expandability. Roumiguié M, Estève D, Manceau C, Toulet A, Gilleron J, Belles C, Jia Y, Houël C, Pericart S, LeGonidec S, Valet P, Cormont M, Tanti JF, Malavaud B, Bouloumié A, Milhas D, Muller C. Am J Pathol. 2022 Jun;192(6):926-942. Pubmed

THEY ARE SUPPORTING OUR RESEARCH

Slider A BOULOUMIE

SFD

SFD

FEDER

FEDER

INSERM

INSERM

EASD

EASD

AFERO

AFERO

Clarins

Clarins

logotype i2mc
logotype i2mc

Inserm/UPS UMR 1297 - I2MC Institut des Maladies Métaboliques et Cardiovasculaires

1 avenue Jean Poulhès - BP 84225 - 31432 Toulouse Cedex 4

Tél. : 05 61 32 56 00

Contactez-nous

 

Horaires

Du lundi au vendredi
8h30 - 12h30 / 13h45 -16h45

 
logotype i2mc
Privacy Policy

To improve your browsing experience. Cookies provide information on how the site is used: statistics such as the number of visitors, the average length of visits or the number of pages viewed. On the other hand, disabling cookies may prevent you from using certain features, such as sharing content via social networks.
By clicking "Accept", you agree to the use of cookies from this site and to our privacy policy.

You can adjust all your cookie settings by navigating the tabs on the left.